Technology5 min read

MicroED: Small Molecule Structure Determination at Sub-Angstrom Resolution

MicroED uses electron diffraction from microcrystals to solve small molecule and drug compound structures. Learn when MicroED outperforms X-ray crystallography and how Shuimu delivers results.

Shuimu Biosciences

What Is MicroED?

MicroED (Micro-crystal Electron Diffraction) is a technique that uses the electron beam of a cryo-EM to collect diffraction data from microcrystals. Because electrons interact much more strongly with matter than X-rays, crystals that are too small for X-ray diffraction (even <1μm) can produce high-quality MicroED data.

MicroED vs X-ray Crystallography

FeatureMicroEDX-ray Crystallography
Crystal size0.1-10 μm50-500 μm
Resolution0.6-1.5Å0.8-2.0Å
Sample neededMicrogramsMilligrams
TimeHours to daysDays to weeks
PolymorphsCan distinguishMay miss

Applications in Drug Discovery

1. Drug Compound Structures

Determine the 3D structure of API (active pharmaceutical ingredients) for regulatory filings.

2. Polymorph Identification

Different crystal forms of the same drug can have vastly different bioavailability. MicroED can identify and characterize polymorphs from tiny crystals.

3. Natural Product Structure Elucidation

Many natural products form only microcrystals. MicroED can solve structures that resist X-ray analysis.

4. Co-crystal and Salt Screening

Quickly characterize co-crystals and salts for formulation development.

How It Works at Shuimu

  1. Sample delivery: Send microcrystals in mother liquor or dried
  2. Grid preparation: Crystals are dispersed on cryo-EM grids
  3. Data collection: Continuous rotation electron diffraction on 300kV microscope
  4. Structure solution: Direct methods or molecular replacement
  5. Delivery: Atomic model, validation report, and CIF file
  6. Shuimu has solved MicroED structures at resolutions as high as 0.65Å, including drug compounds, natural products, and proteinase K.

    Learn more about our MicroED service or contact us to discuss your small molecule project.

MicroEDsmall moleculedrug structurepolymorphelectron diffractioncryo-EM

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